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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5426927_5427017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5426927 - 5427017

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAA

U12 Branch Point Sequence:

TTGAGCAGAGCA

Flanking Amino Acid:

DFLLNIIQRQASSQSMPWLA

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

60.6

0.26

1.1

67.5

35.1

Major PPT

80.9

0.7

0.8

80.4

31.6

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

39.9

-0.7

2.2

54.22

43.8

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006