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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5427198_5427288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5427198 - 5427288

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTAGATTTCACT

Flanking Amino Acid:

SKEQRAKKRQRQQKQRQLLG

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

77.5

0.62

0.8

71.6

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

49.6

0.05

73.34

43.6

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006