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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5427439_5428000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5427439 - 5428000

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGGGCTTTGATT

Flanking Amino Acid:

QVASRVLAMKGLSLVLSEGG

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

0.85

0.9

39.9

Major PPT

82.5

0.73

0.9

77.4

36.8

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

59.9

0.39

1.4

70.84

41.1

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006