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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5431979_5432350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5431979 - 5432350

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

TGTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTGTTTCTATTT

Flanking Amino Acid:

QTLEQNIMDKNYMAHLVEVQ

Intron Amino Acid Position:

1133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

66.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

89.8

0.9

0.7

88.2

29.1

Minor 5ss

34.3

-1.8

3.5

45.4

43.3

Minor BPS

49.2

0.02

1.9

71.43

40.6

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006