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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5434739_5435342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5434739 - 5435342

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACTGGCA

5'SS Class:

major

3'SS Sequence:

AATTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AACATTGTAATT

Flanking Amino Acid:

QYSSRHRISDVRGGFLHLTE

Intron Amino Acid Position:

1346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

83.8

0.76

0.8

77.8

35.5

Minor 5ss

-2.4

3.6

38.8

46.4

Minor BPS

45.8

-0.2

1.9

59.06

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006