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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5438039_5438669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5438039 - 5438669

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGGCT

5'SS Class:

major

3'SS Sequence:

TCTCACATAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TCTCACATAACA

Flanking Amino Acid:

WQGRDQRTPQKRREEFVLHL

Intron Amino Acid Position:

1564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

64.4

38.9

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

68.7

0.42

62.8

36.8

Minor 5ss

30.5

-2.2

3.8

47.6

Minor BPS

56.9

0.21

1.8

71.22

40.2

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006