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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5438897_5439442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5438897 - 5439442

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGTTG

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

AAGCAGTAACCA

Flanking Amino Acid:

LTSCIQQWGSSSVGKCCQDL

Intron Amino Acid Position:

1639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.5

41.6

Major BPS

54.4

0.11

1.2

36.4

Major PPT

93.3

0.97

0.6

92.4

17.9

Minor 5ss

33.5

-1.9

3.6

45.4

49.7

Minor BPS

34.4

-1.1

2.3

41.1

39.2

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006