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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5443874_5443986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5443874 - 5443986

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATGTTTTAATC

Flanking Amino Acid:

LALRSIQNNPSIAADFLPTF

Intron Amino Acid Position:

1962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.58

0.9

67.2

42.8

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

60.2

0.3

1.3

63.26

36.7

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006