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Intron Name: Anas_platyrhynchos_platyrhynchos_15_546352_547947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

546352 - 547947

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGAGCG

5'SS Class:

major

3'SS Sequence:

GCTTTTATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTGCTTTTATT

Flanking Amino Acid:

SLTPLEYISNIGQYIMSLPL

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

65.5

38.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.1

0.63

0.9

70.3

Minor 5ss

33.2

-1.9

3.4

44.4

43.2

Minor BPS

58.9

0.36

1.7

76.14

40.9

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067