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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5468230_5469074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468230 - 5469074

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CTGATGTTATCT

Flanking Amino Acid:

VHKPESKNLKATINAGEDKS

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

81.7

0.71

0.7

80.5

24.9

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

45.1

-0.2

2.3

63.49

46.9

Associated Gene:

Gene:

MICALL2

Ensembl Gene ID:

ENSAPLG00000013527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014128

5460758 - 5476349

15592