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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5473048_5473558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5473048 - 5473558

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATTCCTATGT

Flanking Amino Acid:

QNCEAVSPTKLHPDYIPEEE

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.74

0.8

77.1

37.1

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

45.3

-0.2

2.1

64.68

45.7

Associated Gene:

Gene:

MICALL2

Ensembl Gene ID:

ENSAPLG00000013527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014128

5460758 - 5476349

15592