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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5474771_5475069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5474771 - 5475069

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GTAGCTGTGAGA

Flanking Amino Acid:

MELRHLMNKPEELKTRRERE

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

80.7

0.69

0.9

76.8

37.3

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

41.4

-0.6

2.2

50.89

41.1

Associated Gene:

Gene:

MICALL2

Ensembl Gene ID:

ENSAPLG00000013527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014128

5460758 - 5476349

15592