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Intron Name: Anas_platyrhynchos_platyrhynchos_15_548032_548523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

548032 - 548523

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CCCCCCTTACAG

Flanking Amino Acid:

QQLLLVSKMEGWNSGGIGET

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

75.1

0.56

0.8

67.5

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

46.4

-0.4

1.8

45.4

46.8

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067