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Intron Name: Anas_platyrhynchos_platyrhynchos_15_548665_549881_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

548665 - 549881

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTTTG

5'SS Class:

major

3'SS Sequence:

GTGTGTGCGTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TGTATGTAAACA

Flanking Amino Acid:

SLMETLYTLKEKGTSNHNLL

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.7

43.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

56.3

0.14

1.1

54.8

45.8

Minor 5ss

-0.2

2.9

66.4

45.1

Minor BPS

46.9

-0.2

2.3

64.15

42.3

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067