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Intron Name: Anas_platyrhynchos_platyrhynchos_15_550069_551813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

550069 - 551813

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CGCTTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTGGTGACT

Flanking Amino Acid:

CGDFEQQLANRILSTAGKYL

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.2

0.66

0.9

75.9

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

46.3

-0.2

2.6

73.86

43.8

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067