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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5534607_5541614_R

Intron Information:

Intron Rank:

142279

Intron Class:

major

Intron Phase:

Intron Coordinates:

5534607 - 5541614

Intron Length:

7008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGGTTT

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCCTGCCCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

70.4

42.5

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

70.5

0.46

0.7

65.6

23.3

Minor 5ss

40.8

-1

3.7

55.1

49.1

Minor BPS

36.6

-1

2.2

43.3

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041572

5533556 - 5541782

8227