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Intron Name: Anas_platyrhynchos_platyrhynchos_15_553824_554153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

553824 - 554153

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATTCAG

5'SS Class:

major

3'SS Sequence:

AATTGTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LLIQISAVPLEHWEVIDCVQ

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

63.4

42.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.9

0.45

67.4

43.1

Minor 5ss

33.8

-1.8

2.9

38.2

40.8

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067