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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5541725_5542570_R

Intron Information:

Intron Rank:

142278

Intron Class:

major

Intron Phase:

Intron Coordinates:

5541725 - 5542570

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACA

5'SS Class:

major

3'SS Sequence:

TGTTTTTTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

AATTCCTCATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

67.6

39.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

81.8

0.72

76.9

42.1

Minor 5ss

32.8

-2

3.1

40.2

45.7

Minor BPS

55.9

0.18

1.8

67.55

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018149

5540440 - 5543157

2718