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Intron Name: Anas_platyrhynchos_platyrhynchos_15_554282_556143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

554282 - 556143

Intron Length:

1862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAGGTTCT

5'SS Class:

major

3'SS Sequence:

TGATTCTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GTAGACTAAACA

Flanking Amino Acid:

GLEVAMLPNLKEQNLVKVME

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.1

66.1

40.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

78.6

0.64

0.9

73.9

36.5

Minor 5ss

42.7

-0.8

3.1

55.2

43.1

Minor BPS

49.1

-0

62.04

43.6

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067