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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5592114_5593173_R

Intron Information:

Intron Rank:

149175

Intron Class:

major

Intron Phase:

Intron Coordinates:

5592114 - 5593173

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTCCAG

U12 Branch Point Sequence:

CTTTCCCTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

42.9

-0.4

1.6

52.1

43.1

Major PPT

76.2

0.59

80.1

25.8

Minor 5ss

-1.1

2.7

50.1

46.4

Minor BPS

48.4

-0.2

2.2

61.68

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047862

5587699 - 5593443

5745