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Intron Name: Anas_platyrhynchos_platyrhynchos_15_561830_562055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

561830 - 562055

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

TGTGCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GTCGCCTCACTG

Flanking Amino Acid:

LIQEVNNVLQETSHQALQNM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

44.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

74.2

0.55

0.9

66.6

35.6

Minor 5ss

29.5

-2.3

3.4

32.7

42.4

Minor BPS

44.8

-0.5

1.9

47.73

45.9

Associated Gene:

Gene:

COG7

Ensembl Gene ID:

ENSAPLG00000012674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013246

540657 - 563723

23067