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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5650790_5651319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5650790 - 5651319

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CAGCTTCTAATT

Flanking Amino Acid:

GRAAAGSVSVRMAKKNTQSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

38.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.9

0.63

0.9

68.8

Minor 5ss

25.5

-2.8

3.1

30.6

43.3

Minor BPS

-0.1

1.6

58.3

39.3

Associated Gene:

Gene:

C7orf50

Ensembl Gene ID:

ENSAPLG00000026748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021583

5650548 - 5774913

124366