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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5651450_5748322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5651450 - 5748322

Intron Length:

96873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTTTATTTAAAT

Flanking Amino Acid:

EPKKMKESLQETDEEDLTPE

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.9

38.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

87.7

0.85

0.8

85.7

33.4

Minor 5ss

34.5

-1.8

3.3

47.2

Minor BPS

66.4

0.59

1.6

82.06

39.2

Associated Gene:

Gene:

C7orf50

Ensembl Gene ID:

ENSAPLG00000026748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021583

5650548 - 5774913

124366

ENSAPLT00000047275

5651077 - 5774913

123837