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Intron Name: Anas_platyrhynchos_platyrhynchos_15_571272_572130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

571272 - 572130

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTATTTC

5'SS Class:

major

3'SS Sequence:

CTACCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

CATCACTGAACA

Flanking Amino Acid:

RDAYQMLKKQGIVKEDPKLP

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

69.4

35.8

Major BPS

60.7

0.27

65.3

28.1

Major PPT

0.54

0.9

64.9

Minor 5ss

46.6

-0.4

2.5

61.9

42.9

Minor BPS

54.1

0.12

1.7

64.57

40.9

Associated Gene:

Gene:

GGA2

Ensembl Gene ID:

ENSAPLG00000012336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012862

562920 - 576225

13306