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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5718231_5740201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5718231 - 5740201

Intron Length:

21971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAC

U12 Branch Point Sequence:

ATTGGTTTACCT

Flanking Amino Acid:

SPTREQSADPVVQSSTDILL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

53.6

0.09

1.4

49.1

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

49.6

0.05

2.1

73.4

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001030

5692764 - 5740415

47652