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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5774585_5789419_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5774585 - 5789419

Intron Length:

14835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGAGAAG

5'SS Class:

weak_major

3'SS Sequence:

CCTCGCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TAATGAATAACC

Flanking Amino Acid:

DGSDAEDPSMAAGRELTFPC

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.1

51.6

40.8

Major BPS

67.7

0.44

38.9

Major PPT

0.36

0.9

59.6

35.6

Minor 5ss

24.3

-3

3.2

25.9

39.5

Minor BPS

46.7

-0.2

2.2

63.16

41.4

Associated Gene:

Gene:

C7orf50

Ensembl Gene ID:

ENSAPLG00000026748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026297

5748269 - 5791583

43315