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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5797396_5798575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5797396 - 5798575

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

ATTTTTGCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

YIDALVFKQEEKNKDSPFYD

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.8

30.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.74

0.9

77.1

36.6

Minor 5ss

45.7

-0.5

2.5

58.1

46.4

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028395

5790933 - 5800680

9748

ENSAPLT00000012388

5791781 - 5806425

14645

ENSAPLT00000038892

5790934 - 5800680

9747