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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5798715_5799066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5798715 - 5799066

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACAC

5'SS Class:

major

3'SS Sequence:

TTTTGCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTCACTTCATG

Flanking Amino Acid:

LLMMKYPEIQKKVHAEIERV

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

68.8

36.3

Major BPS

78.6

0.71

79.6

32.9

Major PPT

84.2

0.77

0.8

78.1

30.7

Minor 5ss

-1.8

3.1

43.1

Minor BPS

46.6

-0.4

52.01

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038892

5790934 - 5800680

9747

ENSAPLT00000028395

5790933 - 5800680

9748

ENSAPLT00000012388

5791781 - 5806425

14645