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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5820225_5820706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5820225 - 5820706

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGATCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATCTCTTTGATC

Flanking Amino Acid:

VNFRGYVIPKGTEVIPLLTS

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

0.85

0.9

39.9

Major PPT

80.6

0.69

0.9

77.4

36.6

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

0.58

1.1

71.16

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028148

5819507 - 5826274

6768

ENSAPLT00000010742

5819507 - 5826274

6768