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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5821602_5822143_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5821602 - 5822143

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTAA

5'SS Class:

major

3'SS Sequence:

TGTTTTGAAGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TATTACCTGATT

Flanking Amino Acid:

VDAFLMKQQQSKKPHTMFHN

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.2

33.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

49.2

-0

1.8

59.4

45.2

Minor 5ss

38.5

-1.3

49.6

46.6

Minor BPS

0.27

1.9

78.08

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028148

5819507 - 5826274

6768