Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_5901017_5901305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5901017 - 5901305

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CACTGTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TCTTCTGTATCC

Flanking Amino Acid:

RRLMYFKDPLDAFARGEVFI

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

69.6

36.5

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

67.9

0.4

0.9

58.5

38.1

Minor 5ss

31.4

-2.1

3.1

36.2

41.7

Minor BPS

51.1

0.01

2.2

69.42

42.8

Associated Gene:

Gene:

ADAP1

Ensembl Gene ID:

ENSAPLG00000009732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010164

5847081 - 5902659

55579