Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_5913449_5916354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5913449 - 5916354

Intron Length:

2906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

GTGTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAG

U12 Branch Point Sequence:

GTTCATTTAAGC

Flanking Amino Acid:

AHQMYRTLFFRYMSQGKHPE

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

66.8

0.42

1.5

75.7

36.5

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

52.9

0.07

1.8

65.59

39.7

Associated Gene:

Gene:

GET4

Ensembl Gene ID:

ENSAPLG00000009577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009999

5906563 - 5916788

10226