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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5919296_5920031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5919296 - 5920031

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

AAATCTTCATCT

Flanking Amino Acid:

TSAPRKFSVYGLDDEYQEEG

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.8

0.72

0.9

75.7

38.1

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

51.5

0.13

1.8

69.01

41.5

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000034955

5918670 - 5939572

20903