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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5920987_5921565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5920987 - 5921565

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTGATAACT

Flanking Amino Acid:

GMVDFALESGGGSILSTRCS

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.2

0.55

1.7

88.2

29.1

Minor 5ss

36.8

-1.5

2.9

51.6

44.9

Minor BPS

52.7

0.16

2.3

82.09

39.1

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000034955

5918670 - 5939572

20903