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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5924935_5925434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5924935 - 5925434

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TGTACTCAAAGT

Flanking Amino Acid:

HLKEMKLEEKTDFLALHREH

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

70.5

0.46

73.9

34.5

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

44.1

-0.3

2.2

65.88

44.6

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034955

5918670 - 5939572

20903

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878