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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5925948_5927090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5925948 - 5927090

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCACTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

TTCTGCTCACTA

Flanking Amino Acid:

LFVIPLLFLLGIWFWGFDGF

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

33.9

Major BPS

0.35

1.2

60.7

45.9

Major PPT

61.6

0.26

1.1

60.5

34.4

Minor 5ss

31.9

-2.1

3.3

44.6

Minor BPS

46.8

-0.2

2.2

62.86

44.2

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000034955

5918670 - 5939572

20903

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689