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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5927336_5928013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5927336 - 5928013

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTACTATC

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCACGTCACT

Flanking Amino Acid:

SLLWLAILSPGRAASGVFRL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

77.3

37.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.79

0.7

77.9

36.6

Minor 5ss

42.2

-0.9

2.6

55.2

41.9

Minor BPS

47.6

-0.1

2.5

78.43

43.5

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000009252

5918670 - 5939572

20903