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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5927336_5929490_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5927336 - 5929490

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGACTTG

5'SS Class:

weak_major

3'SS Sequence:

TTTTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCACGTCACT

Flanking Amino Acid:

RTISHTFSYAGRAASGVFRL

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

55.1

44.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.79

0.7

77.9

36.6

Minor 5ss

41.8

-0.9

3.2

55.8

48.5

Minor BPS

47.6

-0.1

2.5

78.43

43.5

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034955

5918670 - 5939572

20903