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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5928113_5929892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5928113 - 5929892

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATAACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTGTTATAACC

Flanking Amino Acid:

SHHDVNEESICYFMLHVLRT

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.31

56.3

43.4

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

60.4

0.31

1.7

74.35

36.6

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042907

5918670 - 5945358

26689