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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5929602_5929892_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5929602 - 5929892

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCACAACCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GTCCCATTAATC

Flanking Amino Acid:

SHHDVNEESICDDYKGKKLL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

55.4

0.12

47.6

33.8

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

59.2

0.27

1.6

39.4

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034955

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000041741

5918481 - 5945358

26878