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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5932640_5933122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5932640 - 5933122

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTAAT

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATGAA

U12 Branch Point Sequence:

TCTTCTTTGAAG

Flanking Amino Acid:

REQTEVDHFWGLDDDGEPKG

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

77.9

38.6

Major BPS

49.9

-0

1.2

43.7

39.2

Major PPT

80.6

0.69

82.7

26.3

Minor 5ss

35.6

-1.6

3.1

42.1

44.8

Minor BPS

64.6

0.32

1.5

67.24

40.8

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000034955

5918670 - 5939572

20903