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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5933808_5939475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5933808 - 5939475

Intron Length:

5668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CGGTTCTTATTT

Flanking Amino Acid:

PENTGYTYALSSSYSSDARD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.6

0.67

0.9

78.2

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

56.1

0.27

1.6

67.58

Associated Gene:

Gene:

SUN1

Ensembl Gene ID:

ENSAPLG00000008834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032287

5918670 - 5939572

20903

ENSAPLT00000009252

5918670 - 5939572

20903

ENSAPLT00000042907

5918670 - 5945358

26689

ENSAPLT00000041741

5918481 - 5945358

26878

ENSAPLT00000034955

5918670 - 5939572

20903