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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5961432_5964083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5961432 - 5964083

Intron Length:

2652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TGCTCCAAAATA

Flanking Amino Acid:

LQLDVIANHSGPVIGEALDD

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

0.7

0.8

73.8

36.9

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

50.5

0.01

64.78

41.9

Associated Gene:

Gene:

DNAAF5

Ensembl Gene ID:

ENSAPLG00000008703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009064

5952343 - 5980493

28151