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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5964253_5969126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5964253 - 5969126

Intron Length:

4874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CTATTTTTAACA

Flanking Amino Acid:

TPDSQHLKEKAEETVCSLAE

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

80.2

0.68

0.9

76.9

35.8

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

73.5

0.73

1.2

75.26

36.4

Associated Gene:

Gene:

DNAAF5

Ensembl Gene ID:

ENSAPLG00000008703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009064

5952343 - 5980493

28151