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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5978599_5979380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5978599 - 5979380

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATCCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTTTTTAATC

Flanking Amino Acid:

AQRLFDEIPKVRQAVTTVIG

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

77.3

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.3

0.32

0.9

58.9

37.1

Minor 5ss

43.3

-0.7

3.3

63.6

48.1

Minor BPS

68.6

0.56

1.2

68.66

38.1

Associated Gene:

Gene:

DNAAF5

Ensembl Gene ID:

ENSAPLG00000008703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009064

5952343 - 5980493

28151