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Intron Name: Anas_platyrhynchos_platyrhynchos_15_599894_603278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

599894 - 603278

Intron Length:

3385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATATGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TCTGTCATAAGC

Flanking Amino Acid:

PINSFSSFPIGMNSNLNVNM

Intron Amino Acid Position:

1433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

78.3

32.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

76.6

0.6

0.9

74.2

40.7

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

48.4

-0.1

62.12

43.7

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375

ENSAPLT00000010410

594145 - 629519

35375