Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_60115_60671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60115 - 60671

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TCTTCACCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

CTGTCTTCACCC

Flanking Amino Acid:

ISKGFYMVQNIKPQPPFNLT

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

0.6

1.2

75.9

36.3

Major PPT

76.1

0.59

0.8

69.6

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

49.8

-0

1.9

61.79

44.2

Associated Gene:

Gene:

IL21R

Ensembl Gene ID:

ENSAPLG00000015284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020960

51741 - 71316

19576

ENSAPLT00000015934

52058 - 67690

15633