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Intron Name: Anas_platyrhynchos_platyrhynchos_15_603490_603746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

603490 - 603746

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TATATTATAACT

Flanking Amino Acid:

SGGRQQQEQQGRSLSMQQQM

Intron Amino Acid Position:

1324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

60.4

0.4

1.6

78.58

37.2

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375