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Intron Name: Anas_platyrhynchos_platyrhynchos_15_604062_604292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

604062 - 604292

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTCCGTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

GCTCTTTGTACT

Flanking Amino Acid:

QVPPPLLSPQVPVSLLKYAP

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

61.6

0.29

1.4

63.4

Major PPT

75.6

0.58

0.9

68.8

37.1

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

46.5

-0.1

1.7

62.26

41.6

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375

ENSAPLT00000010410

594145 - 629519

35375