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Intron Name: Anas_platyrhynchos_platyrhynchos_15_604751_605097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

604751 - 605097

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

GTCTGTCCAATC

Flanking Amino Acid:

SMDRGPYFDKDGIVADESQN

Intron Amino Acid Position:

1225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.9

42.7

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

68.8

0.42

67.6

Minor 5ss

31.5

-2.1

2.4

34.7

Minor BPS

41.6

-0.6

2.1

51.51

40.1

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010410

594145 - 629519

35375